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GJA1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.7TPM
GTEx:13.2RPKM
FANTOM5:24.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA035097

  

Antibody CAB010753

  

Endothelial cells

 Low   Low  

Glandular cells

 Medium   Low  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

17.7
overview Male, age 54 Sample 1
TPM: 25.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 14.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 27.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 20
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 19.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 21.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 13.7
Samples: 149

Max RPKM: 74.5
Min RPKM: 3.6
Std RPKM: 11.2
Median RPKM: 10.5
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 74.5
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 68.7
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 59.2
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 53.1
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 48.6
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 45.3
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 36.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 35.0
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 33.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 25.5
Show all
Colon - Transverse
RPKM: 12.9
Samples: 196

Max RPKM: 145.3
Min RPKM: 2.9
Std RPKM: 13.2
Median RPKM: 9.3
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 145.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 75.8
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 56.5
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 46.3
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 41.6
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 39.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 37.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 37.2
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 36.2
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 36.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

24.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 24.0
FF:10014-101C5 62,83,84 years, mixed 24.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.