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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:41.4TPM
GTEx:9.5RPKM
FANTOM5:63.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA017177

  

Squamous epithelial cells

 Medium  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

41.4
overview Female, age 70 Sample 1
TPM: 33.1
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 48.4
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 42.7
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

9.5

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 9.5
Samples: 286

Max RPKM: 23.5
Min RPKM: 3.1
Std RPKM: 2.6
Median RPKM: 9.3
GTEX-NPJ8-1926-SM-3MJGB 40-49 years, male 23.5
GTEX-139YR-1726-SM-5IFFK 50-59 years, male 22.4
GTEX-ZYWO-1026-SM-5E45U 40-49 years, female 17.3
GTEX-12ZZX-1326-SM-5DUWI 40-49 years, female 16.9
GTEX-WFG7-1126-SM-4LMK3 20-29 years, male 15.7
GTEX-12KS4-0926-SM-5BC5S 30-39 years, male 15.5
GTEX-13O21-0626-SM-5IJDI 50-59 years, male 15.4
GTEX-144GO-2726-SM-5O9A2 60-69 years, male 15.4
GTEX-11EMC-2226-SM-5A5JW 60-69 years, female 15.2
GTEX-14C38-2126-SM-5RQJO 50-59 years, male 15.2
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

63.8

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 63.8
FF:10015-101C6 68,74,75 years, mixed 63.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.