Fields »
ABOUT
HELP
BLOG
SLC25A27

COLON - Expression summary

RNA expression
HPA:11.3TPM
GTEx:12.6RPKM
FANTOM5:14.8Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

11.3
overview Male, age 54 Sample 1
TPM: 8.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 18.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 13.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 26
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

12.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 16.6
Samples: 149

Max RPKM: 40.4
Min RPKM: 3.4
Std RPKM: 7.3
Median RPKM: 15.0
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 40.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 36.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 35.1
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 32.1
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 30.9
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 30.1
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 29.7
GTEX-145LS-2926-SM-5O99G 60-69 years, female 29.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 27.5
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 27.4
Show all
Colon - Transverse
RPKM: 9.6
Samples: 196

Max RPKM: 26.3
Min RPKM: 1.7
Std RPKM: 5.6
Median RPKM: 7.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 26.3
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 25.9
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 25.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 24.9
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 24.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 23.8
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 22.2
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 22.2
GTEX-S341-1426-SM-4AD6U 40-49 years, female 22.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 21.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

14.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 14.8
FF:10014-101C5 62,83,84 years, mixed 14.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.