Fields »
ABOUT
HELP
BLOG
DDAH1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:42.6TPM
GTEx:8.8RPKM
FANTOM5:71.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA006308

  

Endothelial cells

 Low  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

42.6
overview Male, age 54 Sample 1
TPM: 50.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 42.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 48.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 53
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 17.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 29.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 66.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 46.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 22.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 61.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 50.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 38.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 26.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.1
Samples: 149

Max RPKM: 11.1
Min RPKM: 1.5
Std RPKM: 2.0
Median RPKM: 4.9
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 11.1
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 10.9
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 10.4
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 10.3
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 10.2
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 9.5
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 9.4
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 9.3
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 9.3
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 9.1
Show all
Colon - Transverse
RPKM: 11.7
Samples: 196

Max RPKM: 26.5
Min RPKM: 2.1
Std RPKM: 5.5
Median RPKM: 11.8
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 26.5
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 23.5
GTEX-139YR-2126-SM-5KM11 50-59 years, male 22.9
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 22.9
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 22.5
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 21.6
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 21.3
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 20.9
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 20.8
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 20.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

71.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 71.3
FF:10014-101C5 62,83,84 years, mixed 71.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.