Expression of ANKRD29 in cancer - Summary - The Human Protein Atlas

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ANKRD29

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	ANKRD29
Gene description	Ankyrin repeat domain 29
Protein class	Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	4
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Mixed
HPA (cell line):	Cell line enhanced (U-2197, U-87 MG)
HPA (normal tissue):	Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 2 antibodies. HPA041272 , HPA049419
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PROGNOSTIC SUMMARY
Prognostic marker in head and neck cancer (favourable), lung cancer (favourable) and renal cancer (favourable).
Head and neck cancer p<0.001 Lung cancer p<0.001 Renal cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Mixed

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA041272	HPA049419

GENE INFORMATION
Gene name	ANKRD29 (HGNC Symbol)
Synonyms	FLJ25053
Description	Ankyrin repeat domain 29 (HGNC Symbol)
Entrez gene summary
Chromosome	18
Cytoband	q11.2
Chromosome location (bp)	23598926 - 23662885
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000154065 (version 83.38)
Entrez gene	147463
UniProt	Q8N6D5 (UniProt - Evidence at transcript level)
neXtProt	NX_Q8N6D5
Antibodypedia	ANKRD29 antibodies

PROTEIN BROWSER

ANKRD29-001	ANKRD29-002	ANKRD29-004	ANKRD29-008

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ANKRD29-001 ENSP00000468354 ENST00000592179	Q8N6D5 [Direct mapping] Ankyrin repeat domain-containing protein 29 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Show all	GO:0005515 [protein binding] Show all	301 aa 32.4 kDa	No	0
ANKRD29-002 ENSP00000323387 ENST00000322980	Q8N6D5 [Direct mapping] Ankyrin repeat domain-containing protein 29 Show all	Predicted intracellular proteins Show all	GO:0005515 [protein binding] Show all	268 aa 29.2 kDa	No	0
ANKRD29-004 ENSP00000477066 ENST00000585908	V9GYT2 [Direct mapping] Ankyrin repeat domain-containing protein 29 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	110 aa 13 kDa	No	1
ANKRD29-008 ENSP00000465936 ENST00000586087	K7EL63 [Direct mapping] Ankyrin repeat domain-containing protein 29 Show all	Predicted intracellular proteins Show all	GO:0005515 [protein binding] Show all	143 aa 15.5 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.