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SMALL INTESTINE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.1TPM
GTEx:5.5RPKM
FANTOM5:74.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA006563

  

Antibody HPA006564

  

Antibody CAB003844

  

Antibody CAB016290

  

Glandular cells

 Low   Low   Medium   Low  
       
       
       

SMALL INTESTINE - HPA RNA-seq

Average TPM

12.1
overview Male, age 65 Sample 1
TPM: 12.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 8.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 13.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 13.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

5.5

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 5.5
Samples: 88

Max RPKM: 10.7
Min RPKM: 2.6
Std RPKM: 1.3
Median RPKM: 5.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 10.7
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 9.3
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 7.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 7.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 7.4
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 7.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 7.2
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 7.1
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 7.1
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 7.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

74.8

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 74.8
FF:10024-101D6 15,40,85 years, mixed 74.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.