Tissue expression of ABCA9 - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	3.7	TPM
GTEx:	4.7	RPKM
FANTOM5:	5.4	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

High

Antibody staining	Antibody HPA054823
Glandular cells	High

SMALL INTESTINE - HPA RNA-seq

Average TPM	3.7

Male, age 65

Sample 1
TPM: 3

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 3.7

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 3.4

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 4.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	4.7

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 4.7

Samples: 88

Max RPKM: 35.2
Min RPKM: 0.5
Std RPKM: 4.5
Median RPKM: 3.3

GTEX-13OVI-1926-SM-5IJCG

60-69 years, female

35.2

GTEX-1192X-2526-SM-59868

50-59 years, male

16.8

GTEX-117YX-0326-SM-5GICL

50-59 years, male

12.2

GTEX-XMK1-1826-SM-4B66F

40-49 years, male

12.0

GTEX-111CU-1326-SM-5NQ8L

50-59 years, male

10.8

GTEX-13O21-1026-SM-5IJDU

50-59 years, male

10.7

GTEX-ZQUD-0926-SM-57WE3

30-39 years, male

10.6

GTEX-13QBU-1926-SM-5IJEW

40-49 years, female

10.5

GTEX-148VJ-2226-SM-5NQ9M

70-79 years, male

10.0

GTEX-ZF2S-1726-SM-57WFT

50-59 years, female

9.8

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	5.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 5.4

FF:10024-101D6

15,40,85 years, mixed

5.4