Tissue expression of C9orf85 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

RNA expression

HPA:	10.3	TPM
GTEx:	1.3	RPKM

CEREBRAL CORTEX - Annotated protein expression
Pending normal tissue analysis

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	10.3

Male, age 5

Sample 1
TPM: 7.1

Female, age 40

Sample 2
TPM: 15.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 7.9

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	1.3

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 1.2

Samples: 114

Max RPKM: 2.2
Min RPKM: 0.7
Std RPKM: 0.2
Median RPKM: 1.2

GTEX-13G51-3026-SM-5IJB8

60-69 years, male

2.2

GTEX-UTHO-3026-SM-3GAFB

60-69 years, male

2.0

GTEX-YFC4-3126-SM-5PNV6

40-49 years, female

2.0

GTEX-111FC-3126-SM-5GZZ2

60-69 years, male

1.9

GTEX-12ZZY-3026-SM-5GCOU

60-69 years, male

1.9

GTEX-14ASI-3026-SM-5S2PN

60-69 years, male

1.9

GTEX-QVUS-2826-SM-3GADB

60-69 years, female

1.9

GTEX-1192X-3126-SM-5N9BY

50-59 years, male

1.8

GTEX-N7MT-1126-SM-5SI7V

60-69 years, female

1.8

GTEX-NPJ8-1526-SM-2D7VU

40-49 years, male

1.8

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Brain - Frontal Cortex (BA9)
RPKM: 1.3

Samples: 108

Max RPKM: 3.3
Min RPKM: 0.7
Std RPKM: 0.3
Median RPKM: 1.3

GTEX-XMD1-0011-R10A-SM-4AT4A

60-69 years, male

3.3

GTEX-ZE7O-0011-R10a-SM-57WAZ

50-59 years, female

2.6

GTEX-12WSD-0011-R10b-SM-5GU79

60-69 years, female

2.2

GTEX-ZXG5-0011-R10a-SM-57WDD

60-69 years, male

2.0

GTEX-QDT8-0011-R10A-SM-32PKG

30-39 years, female

1.9

GTEX-WWYW-0011-R10A-SM-3NB35

50-59 years, female

1.8

GTEX-YFC4-0011-R10a-SM-4SOK5

40-49 years, female

1.8

GTEX-11ZUS-0011-R10b-SM-5BC79

30-39 years, male

1.7

GTEX-ZDXO-0011-R10a-SM-4WWD8

60-69 years, male

1.7

GTEX-13JVG-0011-R10b-SM-5KM2P

60-69 years, male

1.6

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue