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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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SH3RF2
  • TISSUE

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

SH3RF2

Gene description

SH3 domain containing ring finger 2

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Mixed
HPA (cell line):Cell line enhanced (CACO-2)
HPA (normal tissue):Tissue enhanced (skin)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in several tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data.

Reliability score

Uncertain based on 1 antibody.
HPA058119
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Mixed

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Stomach cancer

STAINING SUMMARY

HPA058119

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several colorectal cancers showed moderate membranous positivity. Few testis and stomach cancers showed moderate cytoplasmic immunoreactivity. Other cancer tissues were weakly stained or negative.

GENE INFORMATION

Gene name

SH3RF2 (HGNC Symbol)

Synonyms

FLJ23654, Hepp1, POSHER, PPP1R39, RNF158

Description

SH3 domain containing ring finger 2 (HGNC Symbol)

Entrez gene summary

Chromosome

5

Cytoband

q32

Chromosome location (bp)

145936579 - 146081791

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000156463 (version 83.38)

Entrez gene

153769

UniProt

Q8TEC5 (UniProt - Evidence at protein level)

neXtProt

NX_Q8TEC5

Antibodypedia

SH3RF2 antibodies

PROTEIN BROWSER

SH3RF2-001
SH3RF2-002

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SH3RF2-001
ENSP00000352028
ENST00000359120
Q8TEC5 [Direct mapping]
Putative E3 ubiquitin-protein ligase SH3RF2
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004864 [protein phosphatase inhibitor activity]
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0008157 [protein phosphatase 1 binding]
GO:0008270 [zinc ion binding]
GO:0010923 [negative regulation of phosphatase activity]
GO:0016567 [protein ubiquitination]
GO:0016874 [ligase activity]
GO:0019902 [phosphatase binding]
GO:0046872 [metal ion binding]
Show all
729 aa
79.3 kDa
No 0
SH3RF2-002
ENSP00000424497
ENST00000511217
Q8TEC5 [Direct mapping]
Putative E3 ubiquitin-protein ligase SH3RF2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004864 [protein phosphatase inhibitor activity]
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0008157 [protein phosphatase 1 binding]
GO:0008270 [zinc ion binding]
GO:0010923 [negative regulation of phosphatase activity]
GO:0016567 [protein ubiquitination]
GO:0016874 [ligase activity]
GO:0019902 [phosphatase binding]
GO:0046872 [metal ion binding]
Show all
729 aa
79.3 kDa
No 0

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