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PHF6

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.1TPM
GTEx:2.5RPKM
FANTOM5:17.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA001023

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

9.1
overview Male, age 54 Sample 1
TPM: 9.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 8.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 13
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.3
Samples: 149

Max RPKM: 4.1
Min RPKM: 1.0
Std RPKM: 0.5
Median RPKM: 2.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 4.1
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 3.7
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 3.5
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 3.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 3.2
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 3.2
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 3.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 3.0
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 3.0
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 2.9
Show all
Colon - Transverse
RPKM: 2.7
Samples: 196

Max RPKM: 5.9
Min RPKM: 1.3
Std RPKM: 0.7
Median RPKM: 2.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 5.9
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 5.0
GTEX-139YR-2126-SM-5KM11 50-59 years, male 4.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 4.8
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 4.7
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 4.5
GTEX-1128S-1626-SM-5H12O 60-69 years, female 4.4
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 4.4
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 4.4
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 4.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

17.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 17.5
FF:10014-101C5 62,83,84 years, mixed 17.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.