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SSBP3

GENERAL INFORMATION

Gene name

 SSBP3

Gene description

 Single stranded DNA binding protein 3

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 7
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HUMAN PROTEIN ATLAS INFORMATION

RNA category
TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

 Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

 Pending cancer tissue analysis.

PROGNOSTIC SUMMARY
Prognostic marker in cervical cancer (favourable) and endometrial cancer (unfavourable).
Cervical cancer p<0.001
Endometrial cancer p<0.001
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RNA EXPRESSION OVERVIEW
TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Pending cancer tissue analysis

STAINING SUMMARY

 

GENE INFORMATION

Gene name

 SSBP3 (HGNC Symbol)

Synonyms

 CSDP, FLJ10355, SSDP, SSDP1

Description

 Single stranded DNA binding protein 3 (HGNC Symbol)

Entrez gene summary

Chromosome

 1

Cytoband

 p32.3

Chromosome location (bp)

 54225432 - 54413479

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000157216 (version 83.38)

Entrez gene

 23648

UniProt

 Q9BWW4 (UniProt - Evidence at protein level)

neXtProt

 NX_Q9BWW4

Antibodypedia

 SSBP3 antibodies

PROTEIN BROWSER
SSBP3-001
SSBP3-002
SSBP3-005
SSBP3-007
SSBP3-013
SSBP3-014
SSBP3-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
SSBP3-001
ENSP00000350067
ENST00000357475
Q9BWW4 [Direct mapping]
Single-stranded DNA-binding protein 3
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
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 368 aa
38.2 kDa 		No 0
SSBP3-002
ENSP00000360371
ENST00000371320
Q9BWW4 [Direct mapping]
Single-stranded DNA-binding protein 3
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0002244 [hematopoietic progenitor cell differentiation]
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
GO:0006461 [protein complex assembly]
GO:0008284 [positive regulation of cell proliferation]
GO:0021501 [prechordal plate formation]
GO:0021547 [midbrain-hindbrain boundary initiation]
GO:0043234 [protein complex]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0060322 [head development]
GO:0060323 [head morphogenesis]
GO:2000744 [positive regulation of anterior head development]
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 388 aa
40.4 kDa 		No 0
SSBP3-005
ENSP00000405880
ENST00000444533
Q5T863 [Direct mapping]
Single-stranded DNA-binding protein 3
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
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 156 aa
15.9 kDa 		No 0
SSBP3-007
ENSP00000360370
ENST00000371319
Q9BWW4 [Direct mapping]
Single-stranded DNA-binding protein 3
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006351 [transcription, DNA-templated]
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 361 aa
37.7 kDa 		No 0
SSBP3-013
ENSP00000414361
ENST00000417664
Q9NW25 [Direct mapping]
Single stranded DNA binding protein 3, isoform CRA_c; Single-stranded DNA-binding protein 3; cDNA FLJ10355 fis, clone NT2RM2001196
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
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 278 aa
28.2 kDa 		No 0
SSBP3-014
ENSP00000431654
ENST00000525990
E9PK49 [Direct mapping]
Single-stranded DNA-binding protein 3
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
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 101 aa
10.5 kDa 		No 0
SSBP3-201
ENSP00000479674
ENST00000610401
A0A087WVT6 [Direct mapping]
Single-stranded DNA-binding protein 3
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
Show all
 361 aa
37.8 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.