Tissue expression of CLEC18C - Summary - The Human Protein Atlas

GENERAL INFORMATION
Gene name	CLEC18C
Gene description	C-type lectin domain family 18, member C
Protein class	Predicted secreted proteins
Predicted localization	Secreted
Number of transcripts	9
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Group enriched (kidney, testis)
GTEx:	Group enriched (kidney, testis)
FANTOM5:	Not detected

Protein evidence

Evidence at transcript level

Protein expression

Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification. Caution, targets protein from more than one gene. Secreted protein, tissue location of RNA and protein might differ and correlation is complex.
Reliability score	Uncertain based on 1 antibody. HPA048976
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

Bronchus

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Group enriched (kidney, testis)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Group enriched (kidney, testis)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Not detected

GENE INFORMATION
Gene name	CLEC18C (HGNC Symbol)
Synonyms	MGC34761
Description	C-type lectin domain family 18, member C (HGNC Symbol)
Entrez gene summary
Chromosome	16
Cytoband	q22.1
Chromosome location (bp)	70173322 - 70187361
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000157335 (version 83.38)
Entrez gene	283971
UniProt	Q8NCF0 (UniProt - Evidence at transcript level)
neXtProt	NX_Q8NCF0
Antibodypedia	CLEC18C antibodies

PROTEIN BROWSER

CLEC18C-001	CLEC18C-003	CLEC18C-006	CLEC18C-007	CLEC18C-008	CLEC18C-010	CLEC18C-201	CLEC18C-202	CLEC18C-203

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CLEC18C-001 ENSP00000455920 ENST00000569347	Q8NCF0 [Direct mapping] C-type lectin domain family 18 member C Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0005768 [endosome] GO:0005783 [endoplasmic reticulum] GO:0005794 [Golgi apparatus] GO:0030247 [polysaccharide binding] Show all	446 aa 49.6 kDa	Yes	0
CLEC18C-003 ENSP00000456676 ENST00000562923	H3BSF2 [Direct mapping] C-type lectin domain family 18 member C Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all		134 aa 14.5 kDa	Yes	0
CLEC18C-006 ENSP00000444875 ENST00000541793	Q8NCF0 [Direct mapping] C-type lectin domain family 18 member C Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0005768 [endosome] GO:0005783 [endoplasmic reticulum] GO:0005794 [Golgi apparatus] GO:0030247 [polysaccharide binding] Show all	446 aa 49.6 kDa	Yes	0
CLEC18C-007 ENSP00000326538 ENST00000314151	Q8NCF0 [Direct mapping] C-type lectin domain family 18 member C Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0005768 [endosome] GO:0005783 [endoplasmic reticulum] GO:0005794 [Golgi apparatus] GO:0030247 [polysaccharide binding] Show all	446 aa 49.6 kDa	Yes	0
CLEC18C-008 ENSP00000444726 ENST00000536907	F5H550 [Direct mapping] C-type lectin domain family 18 member C Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005515 [protein binding] Show all	455 aa 50.5 kDa	Yes	0
CLEC18C-010 ENSP00000457584 ENST00000565806	H3BUD1 [Direct mapping] C-type lectin domain family 18 member C Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all		119 aa 13 kDa	Yes	0
CLEC18C-201 ENSP00000478937 ENST00000611356	A0A087WUU6 [Direct mapping] C-type lectin domain family 18 member C Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005515 [protein binding] Show all	301 aa 33.2 kDa	Yes	0
CLEC18C-202 ENSP00000478195 ENST00000611662	A0A087WTX4 [Direct mapping] C-type lectin domain family 18 member C Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005515 [protein binding] Show all	302 aa 33 kDa	Yes	0
CLEC18C-203 ENSP00000477846 ENST00000618957	Q8NCF0 [Direct mapping] C-type lectin domain family 18 member C Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005515 [protein binding] GO:0005576 [extracellular region] GO:0005768 [endosome] GO:0005783 [endoplasmic reticulum] GO:0005794 [Golgi apparatus] GO:0030247 [polysaccharide binding] Show all	446 aa 49.6 kDa	Yes	0