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CACNA1D

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.6TPM
GTEx:0.5RPKM
FANTOM5:4.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
 

Antibody staining

Antibody HPA020215

  

Endothelial cells

 Not detected  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

1.6
overview Male, age 54 Sample 1
TPM: 2.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 2.1
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.3
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 2.1
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 0.9
GTEX-13D11-0626-SM-5LZYY 50-59 years, female 0.8
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 0.8
GTEX-12696-1926-SM-5EGJT 60-69 years, male 0.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 0.7
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 0.7
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 0.6
GTEX-13111-1926-SM-5GCOL 50-59 years, male 0.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 0.6
Show all
Colon - Transverse
RPKM: 0.6
Samples: 196

Max RPKM: 1.2
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.6
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 1.2
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 1.2
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 1.2
GTEX-144GM-1226-SM-5LU52 20-29 years, male 1.1
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 1.1
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 1.1
GTEX-R55D-1826-SM-48FEF 50-59 years, male 1.1
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 1.1
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 1.1
GTEX-ZPU1-1926-SM-57WDT 40-49 years, male 1.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

4.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 4.1
FF:10014-101C5 62,83,84 years, mixed 4.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.