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AFAP1L1

COLON - Expression summary

RNA expression
HPA:1.5TPM
GTEx:2.9RPKM
FANTOM5:13.0Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

1.5
overview Male, age 54 Sample 1
TPM: 1.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.1
Samples: 149

Max RPKM: 10.0
Min RPKM: 0.9
Std RPKM: 1.5
Median RPKM: 2.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 10.0
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 8.8
GTEX-145LS-2926-SM-5O99G 60-69 years, female 8.4
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 7.6
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 6.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 6.2
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 6.1
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 6.1
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 6.0
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 5.9
Show all
Colon - Transverse
RPKM: 2.6
Samples: 196

Max RPKM: 13.3
Min RPKM: 0.6
Std RPKM: 2.2
Median RPKM: 2.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 13.3
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 13.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 12.1
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 12.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 10.9
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 10.6
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 8.6
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 7.1
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 7.0
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 6.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

13.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 13.0
FF:10014-101C5 62,83,84 years, mixed 13.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.