Tissue expression of PRAC1 - Summary - The Human Protein Atlas

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PRAC1

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	PRAC1
Gene description	Prostate cancer susceptibility candidate 1
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Group enriched (colon, prostate, rectum)
GTEx:	Tissue enhanced (prostate)
FANTOM5:	Tissue enhanced (colon, prostate)

Protein evidence

Evidence at transcript level

Protein expression

Cytoplasmic expression in rectum and colon.

DATA RELIABILITY
Data reliability description	Pending external verification. Presumed off target binding observed and disregarded.
Reliability score	Approved based on 1 antibody. HPA047871
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Group enriched (colon, prostate, rectum)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (prostate)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (colon, prostate)

GENE INFORMATION
Gene name	PRAC1 (HGNC Symbol)
Synonyms	C17orf92, PRAC
Description	Prostate cancer susceptibility candidate 1 (HGNC Symbol)
Entrez gene summary	This gene is reported to be specifically expressed in prostate, rectum and distal colon. Sequence analysis suggests that it may play a regulatory role in the nucleus. [provided by RefSeq, Jul 2008]
Chromosome	17
Cytoband	q21.32
Chromosome location (bp)	48721719 - 48722522
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000159182 (version 83.38)
Entrez gene	84366
UniProt	Q96KF2 (UniProt - Evidence at transcript level)
neXtProt	NX_Q96KF2
Antibodypedia	PRAC1 antibodies

PROTEIN BROWSER

PRAC1-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
PRAC1-001 ENSP00000290294 ENST00000290294	Q96KF2 [Direct mapping] Small nuclear protein PRAC1 Show all	Predicted intracellular proteins Show all	GO:0005634 [nucleus] Show all	57 aa 6 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.