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SHC1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:161.1TPM
GTEx:58.4RPKM
FANTOM5:70.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Not available
Fibroblasts:Medium
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA001844

  

Antibody CAB005374

  

Antibody CAB016305

  

Adipocytes

 Not detected   Low   Medium  

Chondrocytes

 Medium  

Fibroblasts

 Not detected   Medium   Medium  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:High
Peripheral nerve:Not available
 
 
 

Antibody staining

Antibody HPA001844

  

Antibody CAB005374

  

Antibody CAB016305

  

Adipocytes

 Not detected   Medium   Low  

Fibroblasts

 Not detected   Not detected   High  

Peripheral nerve

 Low  
        
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

161.1
N/A Female, age 80 Sample 1
TPM: 144.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 80.8
N/A Female, age 57 Sample 3
TPM: 93.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 281.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 205.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

58.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 54.1
Samples: 350

Max RPKM: 117.5
Min RPKM: 24.8
Std RPKM: 16.2
Median RPKM: 50.5
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 117.5
GTEX-ZTX8-1526-SM-5N9GI 20-29 years, male 116.6
GTEX-11P82-1726-SM-5Q5AT 20-29 years, male 108.0
GTEX-NPJ8-0226-SM-48TBN 40-49 years, male 103.1
GTEX-S3XE-1626-SM-3K2AJ 50-59 years, male 102.6
GTEX-11O72-0226-SM-59869 40-49 years, male 101.9
GTEX-WH7G-2226-SM-3NMBN 40-49 years, male 94.7
GTEX-14BMU-2126-SM-5S2TS 20-29 years, female 93.0
GTEX-X8HC-0226-SM-4E3K1 50-59 years, female 92.9
GTEX-U4B1-1726-SM-3DB9F 40-49 years, male 91.7
Show all
Adipose - Visceral (Omentum)
RPKM: 65.1
Samples: 227

Max RPKM: 123.5
Min RPKM: 30.2
Std RPKM: 19.9
Median RPKM: 61.4
GTEX-Y8LW-0926-SM-4VBQ8 50-59 years, female 123.5
GTEX-11P82-0326-SM-5HL51 20-29 years, male 113.4
GTEX-XUJ4-1726-SM-4BONW 60-69 years, female 113.4
GTEX-13O21-3126-SM-5J1OI 50-59 years, male 111.1
GTEX-13S86-0926-SM-5SI6I 40-49 years, male 108.3
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 108.0
GTEX-ZTSS-1026-SM-5985N 40-49 years, male 106.7
GTEX-14B4R-0526-SM-5QGQT 30-39 years, male 106.5
GTEX-1128S-0926-SM-5GZZU 60-69 years, female 106.2
GTEX-X8HC-2326-SM-4QAS4 50-59 years, female 105.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

70.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 70.4
FF:10010-101C1 65,65,76 years, mixed 70.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.