Tissue expression of SQSTM1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	225.4	TPM
GTEx:	43.5	RPKM
FANTOM5:	470.3	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low

Antibody staining	Antibody CAB004587
Adipocytes	Low
Fibroblasts	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low
Peripheral nerve:	Not detected

Antibody staining	Antibody CAB004587
Adipocytes	Low
Fibroblasts	Low
Peripheral nerve	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	225.4

Female, age 80

Sample 1
TPM: 440.3

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 152.6

Female, age 57

Sample 3
TPM: 162.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 205.8

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 166

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	43.5

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 46.3

Samples: 350

Max RPKM: 84.6
Min RPKM: 24.4
Std RPKM: 10.2
Median RPKM: 46.4

GTEX-13NZ9-0526-SM-5J1OX

50-59 years, male

84.6

GTEX-PX3G-0226-SM-3NB2C

20-29 years, female

74.5

GTEX-X88G-0226-SM-4GIE4

30-39 years, male

73.9

GTEX-Y3IK-2526-SM-4WWDM

50-59 years, female

72.6

GTEX-13O1R-0226-SM-5K7U5

60-69 years, male

72.2

GTEX-ZPU1-2426-SM-4WWFM

40-49 years, male

71.2

GTEX-111CU-1826-SM-5GZYN

50-59 years, male

70.8

GTEX-P78B-0226-SM-3NB1Z

40-49 years, female

67.5

GTEX-QLQW-1226-SM-2S1Q9

30-39 years, male

67.3

GTEX-Y8E4-0726-SM-4WWFN

40-49 years, male

66.6

Show all

Adipose - Visceral (Omentum)
RPKM: 39.2

Samples: 227

Max RPKM: 132.5
Min RPKM: 17.4
Std RPKM: 12.7
Median RPKM: 36.1

GTEX-13IVO-2426-SM-5K7V9

70-79 years, male

132.5

GTEX-WWTW-1326-SM-4MVNT

50-59 years, male

101.8

GTEX-132AR-0526-SM-5J2MJ

50-59 years, female

81.3

GTEX-ZE9C-1326-SM-5S2OW

60-69 years, male

69.4

GTEX-1117F-1326-SM-5EGHH

60-69 years, female

66.3

GTEX-ZTX8-0726-SM-59HL9

20-29 years, male

64.4

GTEX-14B4R-0526-SM-5QGQT

30-39 years, male

64.1

GTEX-131XE-2026-SM-5LZW1

50-59 years, male

63.0

GTEX-13PDP-1226-SM-5K7TW

60-69 years, male

62.3

GTEX-13111-0626-SM-5LZVR

50-59 years, male

60.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	470.3

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 470.3

FF:10010-101C1

65,65,76 years, mixed

470.3