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TNFSF13

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:46.3TPM
GTEx:9.9RPKM
FANTOM5:96.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA004863

  

Glandular cells

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

46.3
overview Male, age 54 Sample 1
TPM: 44.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 50.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 68.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 32
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 42.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 34.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 48.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 40.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 51.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 49.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 55.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 41
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 42.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.2
Samples: 149

Max RPKM: 11.5
Min RPKM: 1.4
Std RPKM: 1.8
Median RPKM: 4.8
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 11.5
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 10.6
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 10.2
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 10.1
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 9.8
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 9.7
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 9.0
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 9.0
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 8.7
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 8.7
Show all
Colon - Transverse
RPKM: 13.5
Samples: 196

Max RPKM: 31.5
Min RPKM: 1.2
Std RPKM: 7.1
Median RPKM: 12.8
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 31.5
GTEX-R55D-1826-SM-48FEF 50-59 years, male 31.3
GTEX-X15G-1326-SM-4PQZJ 50-59 years, female 30.0
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 28.9
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 28.3
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 28.0
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 27.7
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 27.3
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 27.0
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 26.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

96.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 96.1
FF:10014-101C5 62,83,84 years, mixed 96.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.