Cell atlas - SLC45A1 - The Human Protein Atlas

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SLC45A1

TISSUE

CELL

PATHOLOGY

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	SLC45A1
Gene description	Solute carrier family 45, member 1
Protein class	Predicted membrane proteins Transporters
Predicted localization	Membrane
Number of transcripts	2
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Cell line enhanced (U-87 MG)
Protein evidence	Evidence at transcript level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Cell line enhanced (U-87 MG) Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	SLC45A1 (HGNC Symbol)
Synonyms	DNB5
Description	Solute carrier family 45, member 1 (HGNC Symbol)
Entrez gene summary	This gene was isolated initially from a region on chromosome 1p that is frequently deleted in human neuroblastoma, although no causal relationship has since been demonstrated. The encoded protein belongs to the glycoside-pentoside-hexuronide cation symporter transporter family and may play a role in glucose uptake. [provided by RefSeq, Mar 2014]
Chromosome	1
Cytoband	p36.23
Chromosome location (bp)	8317826 - 8344167
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000162426 (version 83.38)
Entrez gene	50651
UniProt	Q9Y2W3 (UniProt - Evidence at transcript level)
neXtProt	NX_Q9Y2W3
Antibodypedia	SLC45A1 antibodies

PROTEIN BROWSER

SLC45A1-001	SLC45A1-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SLC45A1-001 ENSP00000418096 ENST00000471889	A0A0A0MT80 [Direct mapping] HCG21815, isoform CRA_b; Proton-associated sugar transporter A Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based >9TM proteins predicted by MDM Show all	GO:0005355 [glucose transmembrane transporter activity] GO:0015758 [glucose transport] GO:0016021 [integral component of membrane] GO:0055085 [transmembrane transport] GO:1904659 [glucose transmembrane transport] Show all	782 aa 84.5 kDa	No	>9
SLC45A1-201 ENSP00000289877 ENST00000289877	Q9Y2W3 [Direct mapping] Proton-associated sugar transporter A Show all	Transporters Electrochemical Potential-driven transporters Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based >9TM proteins predicted by MDM Show all	GO:0008643 [carbohydrate transport] GO:0015293 [symporter activity] GO:0016021 [integral component of membrane] GO:0055085 [transmembrane transport] Show all	748 aa 80.8 kDa	No	>9

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.