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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

CTRC

Gene description

Chymotrypsin C (caldecrin)

Protein class

Disease related genes
Enzymes
Potential drug targets
Predicted secreted proteins

Predicted localization

Secreted

Number of transcripts

2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enriched (pancreatic cancer)
HPA (cell line):Not detected
HPA (normal tissue):Tissue enriched (pancreas)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Distinct cytoplasmic expression as well as extracellular positivity in pancreas

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 1 antibody.
HPA046920
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enriched (pancreatic cancer)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Pancreatic cancer

STAINING SUMMARY

HPA046920

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer tissues in general were negative.

GENE INFORMATION

Gene name

CTRC (HGNC Symbol)

Synonyms

CLCR, ELA4

Description

Chymotrypsin C (caldecrin) (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the peptidase S1 family. The encoded protein is a serum calcium-decreasing factor that has chymotrypsin-like protease activity. Alternatively spliced transcript variants have been observed, but their full-length nature has not been determined. [provided by RefSeq, Jul 2008]

Chromosome

1

Cytoband

p36.21

Chromosome location (bp)

15438439 - 15449242

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000162438 (version 83.38)

Entrez gene

11330

UniProt

Q99895 (UniProt - Evidence at protein level)

neXtProt

NX_Q99895

Antibodypedia

CTRC antibodies

PROTEIN BROWSER

CTRC-001
CTRC-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CTRC-001
ENSP00000365116
ENST00000375949
Q99895 [Direct mapping]
Chymotrypsin-C
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Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Serine-type peptidases
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Show all
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0006508 [proteolysis]
GO:0006766 [vitamin metabolic process]
GO:0006767 [water-soluble vitamin metabolic process]
GO:0008233 [peptidase activity]
GO:0009235 [cobalamin metabolic process]
GO:0044281 [small molecule metabolic process]
Show all
268 aa
29.5 kDa
Yes 0
CTRC-201
ENSP00000365110
ENST00000375943
Q68DR9 [Direct mapping]
Chymotrypsin-C; Putative uncharacterized protein DKFZp779K0837
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Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Show all
69 aa
7.7 kDa
Yes 0

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