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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:35.8TPM
GTEx:13.4RPKM
FANTOM5:20.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA053162

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Medium  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:High
 

Antibody staining

Antibody HPA053162

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 High  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

35.8
N/A Female, age 80 Sample 1
TPM: 35.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 37
N/A Female, age 57 Sample 3
TPM: 42.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 44.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 19.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 12.6
Samples: 350

Max RPKM: 41.2
Min RPKM: 4.4
Std RPKM: 4.0
Median RPKM: 11.9
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 41.2
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 28.6
GTEX-WY7C-2426-SM-3NB2V 50-59 years, male 28.1
GTEX-13W3W-2526-SM-5SI9P 60-69 years, female 23.3
GTEX-ZDTT-2626-SM-5S2OP 60-69 years, male 22.5
GTEX-11P82-1726-SM-5Q5AT 20-29 years, male 22.2
GTEX-11O72-0226-SM-59869 40-49 years, male 22.1
GTEX-ZQG8-1526-SM-5HL65 60-69 years, female 22.1
GTEX-13VXT-0226-SM-5LU9Q 20-29 years, female 21.4
GTEX-12126-0426-SM-5Q5AP 20-29 years, male 21.3
Show all
Adipose - Visceral (Omentum)
RPKM: 14.8
Samples: 227

Max RPKM: 51.2
Min RPKM: 4.3
Std RPKM: 5.4
Median RPKM: 13.7
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 51.2
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 35.8
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 33.9
GTEX-1128S-0926-SM-5GZZU 60-69 years, female 29.1
GTEX-1399S-1426-SM-5PNYQ 30-39 years, female 27.7
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 26.1
GTEX-1313W-1626-SM-5J1OE 50-59 years, female 24.7
GTEX-U8XE-1926-SM-3DB98 30-39 years, male 24.7
GTEX-ZLWG-0726-SM-5S2NG 50-59 years, female 24.2
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 23.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

20.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 20.4
FF:10010-101C1 65,65,76 years, mixed 20.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.