Tissue expression of COL6A3 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	50.8	TPM
GTEx:	64.4	RPKM
FANTOM5:	203.9	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:

Not detected

Antibody staining	Antibody HPA010080
Adipocytes	Not detected

BREAST - HPA RNA-seq

Average TPM	50.8

Female, age 52

Sample 1
TPM: 55.9

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 88.5

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 1.8

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 57

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	64.4

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 64.4

Samples: 214

Max RPKM: 218.7
Min RPKM: 10.5
Std RPKM: 36.2
Median RPKM: 56.8

GTEX-X4XY-0926-SM-4E3JD

60-69 years, male

218.7

GTEX-XYKS-1326-SM-4BRUN

60-69 years, female

197.8

GTEX-XBED-1626-SM-47JYN

60-69 years, male

166.2

GTEX-ZDXO-0126-SM-5S2ND

60-69 years, male

161.1

GTEX-Y3I4-1526-SM-4TT7K

50-59 years, male

159.6

GTEX-117YX-1426-SM-5H12H

50-59 years, male

158.2

GTEX-XUJ4-1926-SM-4BOOV

60-69 years, female

157.8

GTEX-11EQ9-1826-SM-5Q5AJ

30-39 years, male

149.2

GTEX-WFON-1826-SM-3GILG

40-49 years, male

146.0

GTEX-X261-0626-SM-3NMD9

50-59 years, male

137.1

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	203.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 203.9

FF:10080-102A8

77 years, female

203.9