Tissue expression of SNRK - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	25.7	TPM
GTEx:	7.1	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Medium
Glial cells:	Not detected
Neuronal cells:	Medium
Neuropil:	Low

Antibody staining	Antibody HPA042163
Endothelial cells	Medium
Glial cells	Not detected
Neuronal cells	Medium
Neuropil	Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	25.7

Male, age 5

Sample 1
TPM: 31.6

Female, age 40

Sample 2
TPM: 22.9

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 22.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	7.1

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 6.3

Samples: 114

Max RPKM: 16.2
Min RPKM: 2.9
Std RPKM: 1.6
Median RPKM: 6.1

GTEX-11OF3-2926-SM-5HL78

60-69 years, male

16.2

GTEX-13FXS-3126-SM-5J2NN

50-59 years, male

11.2

GTEX-PVOW-2526-SM-2XCF7

40-49 years, male

9.7

GTEX-WZTO-2926-SM-3NM9I

40-49 years, male

9.2

GTEX-12ZZZ-3026-SM-5BC67

60-69 years, male

8.8

GTEX-TSE9-3026-SM-3DB76

60-69 years, female

8.5

GTEX-ZAK1-3026-SM-5S2MJ

50-59 years, female

8.4

GTEX-X4XX-3026-SM-3NMB2

60-69 years, male

8.2

GTEX-QMR6-1426-SM-32PLA

50-59 years, male

8.1

GTEX-11NUK-2926-SM-5A5MD

50-59 years, male

7.8

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Brain - Frontal Cortex (BA9)
RPKM: 7.9

Samples: 108

Max RPKM: 13.4
Min RPKM: 3.3
Std RPKM: 2.0
Median RPKM: 8.1

GTEX-QDT8-0011-R10A-SM-32PKG

30-39 years, female

13.4

GTEX-Q2AG-0011-R10A-SM-2HMLA

40-49 years, female

12.3

GTEX-QMR6-0011-R10A-SM-32PKO

50-59 years, male

12.3

GTEX-QVJO-0011-R10A-SM-2S1QJ

60-69 years, female

12.1

GTEX-S7SE-0011-R10A-SM-2XCDF

50-59 years, male

11.9

GTEX-T6MN-0011-R10A-SM-32QP7

50-59 years, male

11.7

GTEX-WL46-0011-R10A-SM-3MJFQ

50-59 years, male

11.0

GTEX-12126-0011-R10b-SM-5BC6T

20-29 years, male

10.6

GTEX-QVUS-0011-R10A-SM-3GIK3

60-69 years, female

10.6

GTEX-11ZUS-0011-R10b-SM-5BC79

30-39 years, male

10.5

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue