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SLC4A1AP

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.4TPM
GTEx:10.4RPKM
FANTOM5:20.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA036679

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

12.4
overview Male, age 54 Sample 1
TPM: 12.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 12.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 14.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.1
Samples: 149

Max RPKM: 13.9
Min RPKM: 6.1
Std RPKM: 1.5
Median RPKM: 10.2
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 13.9
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 13.8
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 13.8
GTEX-ZYFG-1826-SM-5GZWX 60-69 years, female 12.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 12.4
GTEX-13111-1926-SM-5GCOL 50-59 years, male 12.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 12.3
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 12.3
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 12.3
GTEX-1122O-1426-SM-5H11R 60-69 years, female 12.1
Show all
Colon - Transverse
RPKM: 10.5
Samples: 196

Max RPKM: 17.1
Min RPKM: 3.3
Std RPKM: 1.6
Median RPKM: 10.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 17.1
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 14.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 14.3
GTEX-144GN-1126-SM-5LU33 50-59 years, male 13.8
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 13.6
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 13.5
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 13.4
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 13.2
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 12.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 12.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

20.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 20.6
FF:10014-101C5 62,83,84 years, mixed 20.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.