Expression of CFAP100 in cancer - Summary - The Human Protein Atlas

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CFAP100

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	CFAP100
Gene description	Cilia and flagella associated protein 100
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	3
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Tissue enhanced (endometrial cancer)
HPA (cell line):	Not detected
HPA (normal tissue):	Group enriched (fallopian tube, testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression mainly in ciliated cells of fallopian tube.

ANTIBODY IHC RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification. Presumed off target binding observed and disregarded.
Reliability score	Approved based on 1 antibody. HPA046354
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Tissue enhanced (endometrial cancer)

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

Endometrial cancer

STAINING SUMMARY

HPA046354

GENE INFORMATION
Gene name	CFAP100 (HGNC Symbol)
Synonyms	CCDC37, FLJ40083, MIA1
Description	Cilia and flagella associated protein 100 (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	q21.3
Chromosome location (bp)	126394939 - 126436556
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000163885 (version 83.38)
Entrez gene	348807
UniProt	Q494V2 (UniProt - Evidence at transcript level)
neXtProt	NX_Q494V2
Antibodypedia	CFAP100 antibodies

PROTEIN BROWSER

CFAP100-001	CFAP100-002	CFAP100-006

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CFAP100-001 ENSP00000344749 ENST00000352312	Q494V2 [Direct mapping] Coiled-coil domain-containing protein 37 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Show all		611 aa 71.1 kDa	No	0
CFAP100-002 ENSP00000423046 ENST00000505024	Q494V2 [Direct mapping] Coiled-coil domain-containing protein 37 Show all	Predicted intracellular proteins Show all		612 aa 71.2 kDa	No	0
CFAP100-006 ENSP00000432494 ENST00000510833	E9PQV5 [Direct mapping] Coiled-coil domain-containing protein 37 Show all	Predicted intracellular proteins Show all		117 aa 13.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.