Expression of RPL39L in cancer - Summary - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

RPL39L

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	RPL39L
Gene description	Ribosomal protein L39-like
Protein class	Predicted intracellular proteins Ribosomal proteins
Predicted localization	Intracellular
Number of transcripts	3
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Expressed in all
HPA (cell line):	Expressed in all
HPA (normal tissue):	Tissue enriched (testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression mainly in testis.

ANTIBODY IHC RELIABILITY
Data reliability description	Caution, targets protein from more than one gene. Pending external verification.
Reliability score	Approved based on 1 antibody. HPA047105
	SHOW MORE

PROGNOSTIC SUMMARY
Prognostic marker in glioma (unfavourable), ovarian cancer (favourable) and endometrial cancer (unfavourable).
Glioma p<0.001 Ovarian cancer p<0.001 Endometrial cancer p<0.001 Show all

RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA047105

GENE INFORMATION
Gene name	RPL39L (HGNC Symbol)
Synonyms	RPL39L1
Description	Ribosomal protein L39-like (HGNC Symbol)
Entrez gene summary	This gene encodes a protein sharing high sequence similarity with ribosomal protein L39. Although the name of this gene has been referred to as 'ribosomal protein L39' in the public databases, its official name is 'ribosomal protein L39-like'. It is not currently known whether the encoded protein is a functional ribosomal protein or whether it has evolved a function that is independent of the ribosome. [provided by RefSeq, Jul 2008]
Chromosome	3
Cytoband	q27.3
Chromosome location (bp)	187120948 - 187180908
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000163923 (version 83.38)
Entrez gene	116832
UniProt	Q96EH5 (UniProt - Evidence at protein level)
neXtProt	NX_Q96EH5
Antibodypedia	RPL39L antibodies

PROTEIN BROWSER

RPL39L-001	RPL39L-002	RPL39L-003

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
RPL39L-001 ENSP00000397240 ENST00000455270	Q96EH5 [Direct mapping] 60S ribosomal protein L39-like Show all	Ribosomal proteins Predicted intracellular proteins Show all	GO:0003723 [RNA binding] GO:0003735 [structural constituent of ribosome] GO:0005515 [protein binding] GO:0005622 [intracellular] GO:0005840 [ribosome] GO:0006412 [translation] GO:0007283 [spermatogenesis] GO:0022625 [cytosolic large ribosomal subunit] Show all	51 aa 6.3 kDa	No	0
RPL39L-002 ENSP00000296277 ENST00000296277	Q96EH5 [Direct mapping] 60S ribosomal protein L39-like Show all	Ribosomal proteins Predicted intracellular proteins Show all	GO:0003723 [RNA binding] GO:0003735 [structural constituent of ribosome] GO:0005515 [protein binding] GO:0005622 [intracellular] GO:0005840 [ribosome] GO:0006412 [translation] GO:0007283 [spermatogenesis] GO:0022625 [cytosolic large ribosomal subunit] Show all	51 aa 6.3 kDa	No	0
RPL39L-003 ENSP00000389356 ENST00000433055	Q96EH5 [Direct mapping] 60S ribosomal protein L39-like Show all	Ribosomal proteins Predicted intracellular proteins Show all	GO:0003723 [RNA binding] GO:0003735 [structural constituent of ribosome] GO:0005515 [protein binding] GO:0005622 [intracellular] GO:0005840 [ribosome] GO:0006412 [translation] GO:0007283 [spermatogenesis] GO:0022625 [cytosolic large ribosomal subunit] Show all	51 aa 6.3 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.