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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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GRPEL2
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

GRPEL2

Gene description

GrpE-like 2, mitochondrial (E. coli)

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Tissue enhanced (esophagus)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

General cytoplasmic expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data.

Reliability score

Uncertain based on 2 antibodies.
HPA018173 , HPA023211
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in liver cancer (unfavourable), colorectal cancer (favourable), endometrial cancer (unfavourable) and renal cancer (unfavourable).
Liver cancer p<0.001
Colorectal cancer p<0.001
Endometrial cancer p<0.001
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Testis cancer

STAINING SUMMARY

HPA018173
HPA023211

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Moderate cytoplasmic staining was observed in most malignancies. Several colorectal cancers were strongly stained while several skin and renal cancers were negative or weakly stained.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most of the malignant tissues displayed weak to moderate cytoplasmic and occasional nuclear positivity except for gastric and testicular cancers which exhibited predominantly strong cytoplasmic positivity.

GENE INFORMATION

Gene name

GRPEL2 (HGNC Symbol)

Synonyms

DKFZp451C205, FLJ23713, Mt-GrpE#2

Description

GrpE-like 2, mitochondrial (E. coli) (HGNC Symbol)

Entrez gene summary

Chromosome

5

Cytoband

q32

Chromosome location (bp)

149345430 - 149354583

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000164284 (version 83.38)

Entrez gene

134266

UniProt

Q8TAA5 (UniProt - Evidence at protein level)

neXtProt

NX_Q8TAA5

Antibodypedia

GRPEL2 antibodies

PROTEIN BROWSER

GRPEL2-001
GRPEL2-002
GRPEL2-003

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GRPEL2-001
ENSP00000329558
ENST00000329271
Q8TAA5 [Direct mapping]
GrpE protein homolog 2, mitochondrial
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000774 [adenyl-nucleotide exchange factor activity]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005759 [mitochondrial matrix]
GO:0006457 [protein folding]
GO:0006626 [protein targeting to mitochondrion]
GO:0042803 [protein homodimerization activity]
GO:0044267 [cellular protein metabolic process]
GO:0050790 [regulation of catalytic activity]
GO:0051082 [unfolded protein binding]
GO:0051087 [chaperone binding]
Show all
225 aa
25.4 kDa
No 0
GRPEL2-002
ENSP00000397302
ENST00000416916
Q8TAA5 [Direct mapping]
GrpE protein homolog 2, mitochondrial
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000774 [adenyl-nucleotide exchange factor activity]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006457 [protein folding]
GO:0006626 [protein targeting to mitochondrion]
GO:0042803 [protein homodimerization activity]
GO:0044267 [cellular protein metabolic process]
GO:0050790 [regulation of catalytic activity]
GO:0051087 [chaperone binding]
Show all
122 aa
14.3 kDa
No 0
GRPEL2-003
ENSP00000426331
ENST00000513661
D6RGI6 [Direct mapping]
GrpE protein homolog 2, mitochondrial
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000774 [adenyl-nucleotide exchange factor activity]
GO:0005739 [mitochondrion]
GO:0006457 [protein folding]
GO:0042803 [protein homodimerization activity]
GO:0050790 [regulation of catalytic activity]
GO:0051087 [chaperone binding]
Show all
128 aa
14.8 kDa
No 0

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