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DCAF13

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.6TPM
GTEx:5.7RPKM
FANTOM5:23.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA044504

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

20.6
overview Male, age 54 Sample 1
TPM: 15
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 20.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 21.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 17.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 22.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 24.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 24.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 22
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 19.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 26.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.9
Samples: 149

Max RPKM: 12.2
Min RPKM: 2.8
Std RPKM: 1.3
Median RPKM: 4.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 12.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 9.6
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 8.8
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 8.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 8.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 7.8
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 7.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 7.6
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 7.6
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 7.6
Show all
Colon - Transverse
RPKM: 6.3
Samples: 196

Max RPKM: 15.5
Min RPKM: 2.7
Std RPKM: 1.8
Median RPKM: 6.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 15.5
GTEX-144GM-1226-SM-5LU52 20-29 years, male 13.3
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 12.0
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 10.9
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 10.4
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 10.3
GTEX-QMRM-1226-SM-447C6 50-59 years, male 10.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 9.9
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 9.9
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 9.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

23.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 23.7
FF:10014-101C5 62,83,84 years, mixed 23.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.