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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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CFL2
  • premium

    TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

CFL2

Gene description

Cofilin 2 (muscle)

Protein class

Disease related genes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in several tissues, most abundant in muscle tissue.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 1 antibody.
HPA045599
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in urothelial cancer (unfavourable).
Urothelial cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA045599

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most gliomas and hepatocellular cancers along with few melanomas, seminomas and renal cancers showed weak to moderate cytoplasmic immunoreactivity. Remaining cancer tissues were negative.

GENE INFORMATION

Gene name

CFL2 (HGNC Symbol)

Synonyms

NEM7

Description

Cofilin 2 (muscle) (HGNC Symbol)

Entrez gene summary

This gene encodes an intracellular protein that is involved in the regulation of actin-filament dynamics. This protein is a major component of intranuclear and cytoplasmic actin rods. It can bind G- and F-actin in a 1:1 ratio of cofilin to actin, and it reversibly controls actin polymerization and depolymerization in a pH-dependent manner. Mutations in this gene cause nemaline myopathy type 7, a form of congenital myopathy. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2009]

Chromosome

14

Cytoband

q13.1

Chromosome location (bp)

34706769 - 34714823

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000165410 (version 83.38)

Entrez gene

1073

UniProt

Q9Y281 (UniProt - Evidence at protein level)

neXtProt

NX_Q9Y281

Antibodypedia

CFL2 antibodies

PROTEIN BROWSER

CFL2-001
CFL2-002
CFL2-005
CFL2-006

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CFL2-001
ENSP00000298159
ENST00000298159
Q9Y281 [Direct mapping]
Cofilin-2
Q549N0 [Target identity:100%; Query identity:100%]
Cofilin 2 (Muscle), isoform CRA_a; Cofilin 2 (Muscle), isoform CRA_c; Cofilin isoform; cDNA, FLJ94864, Homo sapiens cofilin 2 (muscle) (CFL2), mRNA
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005622 [intracellular]
GO:0007015 [actin filament organization]
GO:0015629 [actin cytoskeleton]
GO:0016363 [nuclear matrix]
GO:0030042 [actin filament depolymerization]
GO:0030836 [positive regulation of actin filament depolymerization]
GO:0031674 [I band]
GO:0045214 [sarcomere organization]
GO:0046716 [muscle cell cellular homeostasis]
GO:0070062 [extracellular exosome]
Show all
166 aa
18.7 kDa
No 0
CFL2-002
ENSP00000340635
ENST00000341223
Q9Y281 [Direct mapping]
Cofilin-2
Q549N0 [Target identity:100%; Query identity:100%]
Cofilin 2 (Muscle), isoform CRA_a; Cofilin 2 (Muscle), isoform CRA_c; Cofilin isoform; cDNA, FLJ94864, Homo sapiens cofilin 2 (muscle) (CFL2), mRNA
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005622 [intracellular]
GO:0015629 [actin cytoskeleton]
GO:0016363 [nuclear matrix]
GO:0030836 [positive regulation of actin filament depolymerization]
GO:0031674 [I band]
GO:0070062 [extracellular exosome]
Show all
166 aa
18.7 kDa
No 0
CFL2-005
ENSP00000452451
ENST00000555765
Q9Y281 [Direct mapping]
Cofilin-2
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005622 [intracellular]
GO:0015629 [actin cytoskeleton]
GO:0016363 [nuclear matrix]
GO:0030836 [positive regulation of actin filament depolymerization]
GO:0031674 [I band]
GO:0070062 [extracellular exosome]
Show all
149 aa
16.9 kDa
No 0
CFL2-006
ENSP00000452188
ENST00000556161
Q9Y281 [Direct mapping]
Cofilin-2
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005622 [intracellular]
GO:0015629 [actin cytoskeleton]
GO:0016363 [nuclear matrix]
GO:0030836 [positive regulation of actin filament depolymerization]
GO:0031674 [I band]
GO:0070062 [extracellular exosome]
Show all
149 aa
16.9 kDa
No 0

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