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HPRT1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:25.3TPM
GTEx:8.9RPKM
FANTOM5:24.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA006360

  

Antibody CAB012200

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Low   High  
   
   
   

COLON - HPA RNA-seq

Average TPM

25.3
overview Male, age 54 Sample 1
TPM: 20.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 17.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 25.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 17
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 29.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 45.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 22.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 22
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 41.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 25.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.7
Samples: 149

Max RPKM: 22.2
Min RPKM: 4.2
Std RPKM: 2.8
Median RPKM: 7.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 22.2
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 19.3
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 16.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 15.4
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 14.3
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 13.7
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 13.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 13.4
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 13.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 13.0
Show all
Colon - Transverse
RPKM: 9.8
Samples: 196

Max RPKM: 23.0
Min RPKM: 4.0
Std RPKM: 3.3
Median RPKM: 9.1
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 23.0
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 22.5
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 21.7
GTEX-1128S-1626-SM-5H12O 60-69 years, female 19.9
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 19.0
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 18.3
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 18.2
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 17.1
GTEX-QMRM-1226-SM-447C6 50-59 years, male 16.7
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 16.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

24.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 24.4
FF:10014-101C5 62,83,84 years, mixed 24.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.