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RNF169

COLON - Expression summary

RNA expression
HPA:4.4TPM
GTEx:0.9RPKM
FANTOM5:36.7Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA046138

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

4.4
overview Male, age 54 Sample 1
TPM: 3.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 6.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.0
Samples: 149

Max RPKM: 2.4
Min RPKM: 0.1
Std RPKM: 0.4
Median RPKM: 1.0
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 2.4
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 2.1
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 2.0
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 2.0
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 1.9
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 1.9
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 1.9
GTEX-XXEK-1826-SM-4BRVC 50-59 years, male 1.9
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 1.9
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 1.7
Show all
Colon - Transverse
RPKM: 0.9
Samples: 196

Max RPKM: 2.4
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.8
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 2.4
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 2.2
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 2.0
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 1.7
GTEX-139YR-2126-SM-5KM11 50-59 years, male 1.7
GTEX-WH7G-1326-SM-4LVMS 40-49 years, male 1.7
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 1.6
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 1.6
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 1.6
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 1.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

36.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 36.7
FF:10014-101C5 62,83,84 years, mixed 36.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.