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PATL1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.0TPM
GTEx:13.0RPKM
FANTOM5:40.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA039030

  

Endothelial cells

 High  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

18.0
overview Male, age 54 Sample 1
TPM: 13.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 12.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 17.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 27.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 21.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 20.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 23.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 20
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 12.2
Samples: 149

Max RPKM: 23.6
Min RPKM: 7.2
Std RPKM: 2.2
Median RPKM: 11.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 23.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 19.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 17.9
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 17.8
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 17.0
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 16.8
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 16.2
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 15.7
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 15.4
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 15.4
Show all
Colon - Transverse
RPKM: 13.6
Samples: 196

Max RPKM: 21.3
Min RPKM: 9.2
Std RPKM: 2.2
Median RPKM: 13.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 21.3
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 21.1
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 20.6
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 20.2
GTEX-144GM-1226-SM-5LU52 20-29 years, male 19.3
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 18.9
GTEX-144GN-1126-SM-5LU33 50-59 years, male 18.6
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 18.5
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 18.4
GTEX-139YR-2126-SM-5KM11 50-59 years, male 18.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

40.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 40.1
FF:10014-101C5 62,83,84 years, mixed 40.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.