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MS4A7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.1TPM
GTEx:6.6RPKM
FANTOM5:43.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA017418

  

Antibody CAB026387

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

24.1
overview Male, age 54 Sample 1
TPM: 15.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 35.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 37
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 20.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 26
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 28.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 28.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 33.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 15.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 39.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.1
Samples: 149

Max RPKM: 30.7
Min RPKM: 0.3
Std RPKM: 3.7
Median RPKM: 4.0
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 30.7
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 15.8
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 15.8
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 14.8
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 13.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 13.3
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 12.4
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 12.1
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 10.9
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 10.9
Show all
Colon - Transverse
RPKM: 7.7
Samples: 196

Max RPKM: 47.5
Min RPKM: 0.3
Std RPKM: 5.2
Median RPKM: 6.5
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 47.5
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 29.2
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 19.8
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 19.6
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 18.2
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 17.9
GTEX-ZZ64-0726-SM-5GZX4 20-29 years, male 17.8
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 17.0
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 16.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 15.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

43.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 43.9
FF:10014-101C5 62,83,84 years, mixed 43.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.