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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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GLOD4
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    TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

GLOD4

Gene description

Glyoxalase domain containing 4

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

7
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Ubiquitous cytoplasmic expression.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Pending external verification.

Reliability score

Supported based on 3 antibodies.
HPA021623 , HPA023246 , HPA023248
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PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer

STAINING SUMMARY

HPA021623
HPA023246
HPA023248

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Moderate to strong cytoplasmic and/or nuclear positivity was observed in most cancers. A majority of cervical, skin and testicular cancers were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer cells showed moderate to strong cytoplasmic positivity. A few cases of lung, skin, renal and gastric cancers were weakly stained.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Most cancer showed very weak cytoplasmic positivity or were negative. Several cases of colorectal, prostate, liver and renal cancers displayed moderate cytoplasmic staining.

GENE INFORMATION

Gene name

GLOD4 (HGNC Symbol)

Synonyms

C17orf25, CGI-150, HC71

Description

Glyoxalase domain containing 4 (HGNC Symbol)

Entrez gene summary

Chromosome

17

Cytoband

p13.3

Chromosome location (bp)

757097 - 783390

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000167699 (version 83.38)

Entrez gene

51031

UniProt

Q9HC38 (UniProt - Evidence at protein level)

neXtProt

NX_Q9HC38

Antibodypedia

GLOD4 antibodies

PROTEIN BROWSER

GLOD4-001
GLOD4-005
GLOD4-007
GLOD4-008
GLOD4-201
GLOD4-202
GLOD4-203

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GLOD4-001
ENSP00000301329
ENST00000301329
Q9HC38 [Direct mapping]
Glyoxalase domain-containing protein 4
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
GO:0070062 [extracellular exosome]
Show all
298 aa
33.2 kDa
No 0
GLOD4-005
ENSP00000301328
ENST00000301328
Q9HC38 [Direct mapping]
Glyoxalase domain-containing protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
GO:0070062 [extracellular exosome]
Show all
313 aa
34.8 kDa
No 0
GLOD4-007
ENSP00000458849
ENST00000573137
I3L1I0 [Direct mapping]
Glyoxalase domain-containing protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
115 aa
12.7 kDa
No 0
GLOD4-008
ENSP00000460634
ENST00000576419
I3L3Q4 [Direct mapping]
Glyoxalase domain-containing protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
227 aa
25.5 kDa
No 0
GLOD4-201
ENSP00000444315
ENST00000536578
F6TLX2 [Direct mapping]
Glyoxalase domain-containing protein 4
Show all
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
502 aa
54.7 kDa
No 0
GLOD4-202
ENSP00000486778
ENST00000625892
I3NI24 [Direct mapping]
Glyoxalase domain-containing protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
36 aa
4.2 kDa
No 0
GLOD4-203
ENSP00000486254
ENST00000628529
I3NI27 [Direct mapping]
Glyoxalase domain-containing protein 4
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
36 aa
4.1 kDa
No 0

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