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PXDC1

GENERAL INFORMATION

Gene name

 PXDC1

Gene description

 PX domain containing 1

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category
TCGA (cancer tissue):Expressed in all
HPA (cell line):Mixed
HPA (normal tissue):Mixed

Protein evidence

 Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

 Pending cancer tissue analysis.

PROGNOSTIC SUMMARY
Prognostic marker in endometrial cancer (unfavourable) and colorectal cancer (unfavourable).
0.00.10.20.30.40.50.60.70.80.91.0 0 1 2 3 4 5 6 7 8 9101112131415161718 Endometrial cancer p<0.001
0.00.10.20.30.40.50.60.70.80.91.0 0 1 2 3 4 5 6 7 8 9101112 Colorectal cancer p<0.001
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RNA EXPRESSION OVERVIEW
TCGA dataset
RNA cancer category: Expressed in all
0.020406080100120140FPKMBreast cancer (BRCA)Cervical cancer (CESC)Colorectal cancer (COAD,READ)Endometrial cancer (UCEC)Glioma (GBM)Head and neck cancer (HNSC)Liver cancer (LIHC)Lung cancer (LUAD,LUSC)Melanoma (SKCM)Ovarian cancer (OV)Pancreatic cancer (PAAD)Prostate cancer (PRAD)Renal cancer (KICH,KIRC,KIRP)Stomach cancer (STAD)Testis cancer (TGCT)Thyroid cancer (THCA)Urothelial cancer (BLCA)

PROTEIN EXPRESSION

Pending cancer tissue analysis

STAINING SUMMARY

 

GENE INFORMATION

Gene name

 PXDC1 (HGNC Symbol)

Synonyms

 C6orf145

Description

 PX domain containing 1 (HGNC Symbol)

Entrez gene summary

Chromosome

 6

Cytoband

 p25.2

Chromosome location (bp)

 3722614 - 3752026

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000168994 (version 83.38)

Entrez gene

 221749

UniProt

 Q5TGL8 (UniProt - Evidence at transcript level)

neXtProt

 NX_Q5TGL8

Antibodypedia

 PXDC1 antibodies

PROTEIN BROWSER
PXDC1-001
PXDC1-003

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
PXDC1-001
ENSP00000369636
ENST00000380283
Q5TGL8 [Direct mapping]
PX domain-containing protein 1
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Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0035091 [phosphatidylinositol binding]
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 231 aa
26.6 kDa 		No 0
PXDC1-003
ENSP00000369630
ENST00000380277
H0Y3G1 [Direct mapping]
PX domain-containing protein 1
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Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
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GO:0035091 [phosphatidylinositol binding]
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 179 aa
20.2 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.