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COMMD8

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.7TPM
GTEx:7.7RPKM
FANTOM5:10.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA035887

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

17.7
overview Male, age 54 Sample 1
TPM: 20.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 17.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 15.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 20
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 17.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 17.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 17.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.2
Samples: 149

Max RPKM: 13.4
Min RPKM: 3.2
Std RPKM: 1.8
Median RPKM: 7.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 13.4
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 12.1
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 11.9
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 11.7
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 11.2
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 11.0
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 10.8
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 10.4
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 10.1
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 10.0
Show all
Colon - Transverse
RPKM: 8.0
Samples: 196

Max RPKM: 13.4
Min RPKM: 2.6
Std RPKM: 2.0
Median RPKM: 7.9
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 13.4
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 13.0
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 13.0
GTEX-1128S-1626-SM-5H12O 60-69 years, female 12.6
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 12.3
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 11.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 11.7
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 11.7
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 11.7
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 11.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

10.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 10.9
FF:10014-101C5 62,83,84 years, mixed 10.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.