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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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RNASE2
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  • CELL

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

RNASE2

Gene description

Ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)

Protein class

Enzymes
Plasma proteins
Predicted secreted proteins

Predicted localization

Secreted

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Tissue enriched (glioma)
HPA (cell line):Group enriched (HL-60, NB-4, THP-1, U-937)
HPA (normal tissue):Tissue enriched (bone marrow)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in bone marrow, spleen and in a subset of inflammatory cells.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Presumed off target binding observed and disregarded.

Reliability score

Supported based on 1 antibody.
HPA044983
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PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (unfavourable).
Renal cancer p<0.001
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Tissue enriched (glioma)

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA044983

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A rare case of prostate cancer displayed strong cytoplasmic staining. Remaining malignant tissues were negative.

GENE INFORMATION

Gene name

RNASE2 (HGNC Symbol)

Synonyms

EDN, RAF3, RNS2

Description

Ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is a non-secretory ribonuclease that belongs to the pancreatic ribonuclease family, a subset of the ribonuclease A superfamily. The protein antimicrobial activity against viruses. [provided by RefSeq, Oct 2014]

Chromosome

14

Cytoband

q11.2

Chromosome location (bp)

20955452 - 20956436

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000169385 (version 83.38)

Entrez gene

6036

UniProt

P10153 (UniProt - Evidence at protein level)

neXtProt

NX_P10153

Antibodypedia

RNASE2 antibodies

PROTEIN BROWSER

RNASE2-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

RNASE2-001
ENSP00000303276
ENST00000304625
P10153 [Direct mapping]
Non-secretory ribonuclease
W0UV60 [Target identity:100%; Query identity:100%]
Ribonuclease A F3; Ribonuclease, RNase A family, 2 (Liver, eosinophil-derived neurotoxin)
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Enzymes
   ENZYME proteins
   Hydrolases
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0003676 [nucleic acid binding]
GO:0004519 [endonuclease activity]
GO:0004522 [ribonuclease A activity]
GO:0004540 [ribonuclease activity]
GO:0005576 [extracellular region]
GO:0005764 [lysosome]
GO:0006401 [RNA catabolic process]
GO:0006935 [chemotaxis]
GO:0070062 [extracellular exosome]
GO:0090305 [nucleic acid phosphodiester bond hydrolysis]
GO:0090501 [RNA phosphodiester bond hydrolysis]
GO:0090502 [RNA phosphodiester bond hydrolysis, endonucleolytic]
GO:1903955 [positive regulation of protein targeting to mitochondrion]
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161 aa
18.4 kDa
Yes 0

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