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LINGO1

SOFT TISSUE - Expression summary

RNA expression
HPA:3.2TPM
GTEx:1.4RPKM
FANTOM5:2.1Tags Per Million

SOFT TISSUE - Annotated protein expression

Pending normal tissue analysis

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

3.2
N/A Female, age 80 Sample 1
TPM: 5.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 2.7
N/A Female, age 57 Sample 3
TPM: 1.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 5.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

1.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 1.6
Samples: 350

Max RPKM: 6.7
Min RPKM: 0.2
Std RPKM: 1.1
Median RPKM: 1.2
GTEX-13OVL-0326-SM-5IJCS 50-59 years, male 6.7
GTEX-1269C-2726-SM-5EGJ4 60-69 years, female 6.5
GTEX-11OF3-2426-SM-5Q5AS 60-69 years, male 6.0
GTEX-111FC-0226-SM-5N9B8 60-69 years, male 5.9
GTEX-13PLJ-0126-SM-5L3HU 60-69 years, female 5.8
GTEX-13QJ3-0426-SM-5RQHP 50-59 years, male 5.7
GTEX-Y111-0226-SM-4SOIW 50-59 years, male 5.3
GTEX-145MF-0526-SM-5LUA6 50-59 years, male 4.8
GTEX-ZYFC-0326-SM-5NQ7H 50-59 years, male 4.8
GTEX-SIU8-0226-SM-2XCDS 50-59 years, male 4.5
Show all
Adipose - Visceral (Omentum)
RPKM: 1.2
Samples: 227

Max RPKM: 7.2
Min RPKM: 0.0
Std RPKM: 0.9
Median RPKM: 1.0
GTEX-X585-2526-SM-4QAS1 50-59 years, male 7.2
GTEX-13OW7-1126-SM-5K7V6 50-59 years, male 5.1
GTEX-11ZUS-1826-SM-5FQTR 30-39 years, male 4.5
GTEX-ZAB5-1126-SM-5Q5AD 50-59 years, male 3.7
GTEX-11DXZ-1426-SM-5H12A 50-59 years, male 3.5
GTEX-UPK5-1826-SM-3GAEB 40-49 years, male 3.5
GTEX-11DXX-2026-SM-5EGJL 60-69 years, female 3.3
GTEX-XMK1-0926-SM-4B66X 40-49 years, male 3.2
GTEX-11PRG-1526-SM-5HL6Z 50-59 years, male 3.1
GTEX-ZUA1-2126-SM-57YRB 40-49 years, male 3.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

2.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 2.1
FF:10010-101C1 65,65,76 years, mixed 2.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.