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CHRNB1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.3TPM
GTEx:2.2RPKM
FANTOM5:4.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA005822

  

Antibody CAB011200

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

5.3
overview Male, age 54 Sample 1
TPM: 5.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 6.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.0
Samples: 149

Max RPKM: 4.5
Min RPKM: 0.6
Std RPKM: 0.6
Median RPKM: 1.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 4.5
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 3.5
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 3.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 3.5
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 3.5
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 3.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 3.1
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 3.1
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 3.1
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 2.9
Show all
Colon - Transverse
RPKM: 2.4
Samples: 196

Max RPKM: 4.1
Min RPKM: 0.9
Std RPKM: 0.6
Median RPKM: 2.4
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 4.1
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 3.9
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 3.7
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 3.7
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 3.6
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 3.6
GTEX-X3Y1-1726-SM-4PQZL 40-49 years, male 3.5
GTEX-11NSD-1626-SM-5986U 20-29 years, male 3.4
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 3.4
GTEX-R55D-1826-SM-48FEF 50-59 years, male 3.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

4.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 4.7
FF:10014-101C5 62,83,84 years, mixed 4.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.