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SMALL INTESTINE - Expression summary

RNA expression
HPA:16.4TPM
GTEx:10.7RPKM
FANTOM5:42.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seq

Average TPM

16.4
overview Male, age 65 Sample 1
TPM: 8.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 20.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 17.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 19.2

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

10.7

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 10.7
Samples: 88

Max RPKM: 27.4
Min RPKM: 1.5
Std RPKM: 5.2
Median RPKM: 9.8
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 27.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 26.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 25.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 24.2
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 20.4
GTEX-1192X-2526-SM-59868 50-59 years, male 19.5
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 19.2
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 19.0
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 18.7
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 18.5
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

42.8

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 42.8
FF:10024-101D6 15,40,85 years, mixed 42.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.