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GATM
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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1289.2TPM
GTEx:193.9RPKM
FANTOM5:804.7Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:High
 

Antibody staining

Antibody HPA026077

 

Bile duct cells

Medium  

Hepatocytes

High  
 
 
 

LIVER - HPA RNA-seq

Average TPM

1289.2

N/A Female, age 60 Sample 1
TPM: 1030
overview Male, age 54 Sample 2
TPM: 839.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74 Sample 3
TPM: 1332.8
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62 Sample 4
TPM: 1059.4
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 5
TPM: 1498.2
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53 Sample 6
TPM: 1545.8
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77 Sample 7
TPM: 1321.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72 Sample 8
TPM: 1004.2
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70 Sample 9
TPM: 1106.6
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23 Sample 10
TPM: 2154.5
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

193.9

GTEx sample id

Sample description

RPKM

Liver
RPKM: 193.9
Samples: 119

Max RPKM: 562.5
Min RPKM: 13.6
Std RPKM: 112.0
Median RPKM: 182.3
GTEX-1399T-0826-SM-5IFES 60-69 years, male 562.5
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 523.8
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 425.0
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 422.1
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 398.2
GTEX-QEG4-1826-SM-4R1JN 30-39 years, male 389.5
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 384.4
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 382.8
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 378.6
GTEX-RN64-1826-SM-48FDV 50-59 years, male 365.5
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 360.2
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 358.3
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 353.4
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 349.4
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 345.1
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 333.8
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 326.5
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 319.3
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 318.8
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 306.6
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 300.3
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 297.5
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 292.3
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 286.9
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 285.8
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 283.5
GTEX-13112-1426-SM-5EGH8 50-59 years, male 278.3
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 270.9
GTEX-YECK-1926-SM-4W21H 60-69 years, male 270.5
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 259.5
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 258.8
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 258.6
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 254.4
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 251.1
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 247.0
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 242.9
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 241.2
GTEX-XOTO-0826-SM-4B65O 50-59 years, male 239.7
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 239.2
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 231.6
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 231.6
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 227.6
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 224.7
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 224.6
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 224.3
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 214.0
GTEX-RU72-1426-SM-46MUF 50-59 years, female 208.5
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 207.4
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 205.8
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 203.2
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 202.0
GTEX-11ZUS-2526-SM-59872 30-39 years, male 201.7
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 196.3
GTEX-R53T-0326-SM-48FEC 50-59 years, female 191.5
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 190.7
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 190.0
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 186.8
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 182.4
GTEX-QESD-2026-SM-447BI 20-29 years, male 182.4
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 182.3
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 178.4
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 175.9
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 174.4
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 172.5
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 170.9
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 169.4
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 163.6
GTEX-11GSP-0626-SM-5986T 60-69 years, female 162.2
GTEX-P78B-1326-SM-3P611 40-49 years, female 154.0
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 151.9
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 146.4
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 144.0
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 142.7
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 137.9
GTEX-13113-1326-SM-5GCOI 60-69 years, female 137.8
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 133.6
GTEX-QV44-0326-SM-4R1KD 50-59 years, male 132.7
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 129.3
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 127.5
GTEX-X261-1726-SM-4PQYT 50-59 years, male 127.2
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 126.7
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 126.2
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 125.2
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 123.4
GTEX-S33H-1626-SM-4AD68 30-39 years, male 123.4
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 119.6
GTEX-UPIC-0926-SM-4IHLV 20-29 years, female 112.2
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 112.2
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 111.1
GTEX-ZF29-2026-SM-4WWB7 60-69 years, female 108.6
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 107.2
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 106.5
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 106.2
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 106.0
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 101.8
GTEX-Q734-0326-SM-48U15 40-49 years, female 96.3
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 94.9
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 90.8
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 79.6
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 75.3
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 71.6
GTEX-REY6-1226-SM-48FDR 60-69 years, male 69.8
GTEX-QEL4-1226-SM-447A4 50-59 years, male 65.0
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 64.6
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 60.9
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 59.7
GTEX-12696-0826-SM-5EGGE 60-69 years, male 57.3
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 53.8
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 49.0
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 47.9
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 45.4
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 41.3
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 41.2
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 40.8
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 39.5
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 36.4
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 28.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 27.3
GTEX-S32W-1926-SM-4AD63 50-59 years, female 13.6
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

804.7

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 804.7
FF:10018-101C9 64,69,70 years, mixed 804.7

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