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ATOH1

COLON - Expression summary

RNA expression
HPA:18.0TPM
GTEx:7.3RPKM
FANTOM5:22.6Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

18.0
overview Male, age 54 Sample 1
TPM: 33.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 21
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 39.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 12.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 8.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 17
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 17.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 19.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 19
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 12.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 7.3
Min RPKM: 0.0
Std RPKM: 1.0
Median RPKM: 0.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 7.3
GTEX-XBED-1726-SM-47JYO 60-69 years, male 6.9
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 6.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 4.9
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 2.8
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 2.4
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 1.7
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 1.1
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 0.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.6
Show all
Colon - Transverse
RPKM: 12.7
Samples: 196

Max RPKM: 46.3
Min RPKM: 0.0
Std RPKM: 11.3
Median RPKM: 11.5
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 46.3
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 42.1
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 41.6
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 40.9
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 39.5
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 37.3
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 36.9
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 35.1
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 34.8
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 32.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

22.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 22.6
FF:10014-101C5 62,83,84 years, mixed 22.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.