Tissue expression of HECTD4 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	4.9	TPM
GTEx:	4.7	RPKM
FANTOM5:	19.3	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Medium
Peripheral nerve:	Low

Antibody staining	Antibody HPA041062	Antibody HPA045473
Adipocytes	Medium	Not detected
Fibroblasts	Medium	Medium
Peripheral nerve	High

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	Low
Peripheral nerve:	Low
Fibroblasts:	Medium

Antibody staining	Antibody HPA041062	Antibody HPA045473
Adipocytes	Medium	Not detected
Chondrocytes	High
Peripheral nerve	High	Low
Fibroblasts	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	4.9

Female, age 80

Sample 1
TPM: 5.5

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 4.9

Female, age 57

Sample 3
TPM: 5.2

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 4.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 4.5

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	4.7

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 5.0

Samples: 350

Max RPKM: 8.4
Min RPKM: 2.3
Std RPKM: 0.9
Median RPKM: 5.1

GTEX-NFK9-0326-SM-3MJGV

40-49 years, male

8.4

GTEX-OHPM-0226-SM-3LK61

50-59 years, male

7.5

GTEX-P4QT-0226-SM-3LK68

50-59 years, female

7.1

GTEX-UTHO-0426-SM-5SI7N

60-69 years, male

7.1

GTEX-131XF-2226-SM-5EQKG

60-69 years, male

7.0

GTEX-R55D-0326-SM-48FES

50-59 years, male

7.0

GTEX-139D8-0326-SM-5IJCJ

30-39 years, female

6.9

GTEX-QLQ7-1526-SM-2S1QA

60-69 years, male

6.9

GTEX-12WSA-0326-SM-5BC6I

60-69 years, male

6.8

GTEX-13N11-2626-SM-5K7UQ

50-59 years, female

6.8

Show all

Adipose - Visceral (Omentum)
RPKM: 4.2

Samples: 227

Max RPKM: 7.6
Min RPKM: 1.2
Std RPKM: 0.9
Median RPKM: 4.2

GTEX-14DAQ-2526-SM-5RQIO

60-69 years, female

7.6

GTEX-14A6H-1026-SM-5SIAZ

30-39 years, male

6.3

GTEX-11NV4-1426-SM-5BC4W

60-69 years, male

6.2

GTEX-131YS-1726-SM-5HL7G

60-69 years, female

6.2

GTEX-13OW7-1126-SM-5K7V6

50-59 years, male

6.2

GTEX-ZC5H-1626-SM-5HL7L

40-49 years, female

6.2

GTEX-139TU-1426-SM-5LZY9

60-69 years, male

6.1

GTEX-ZDTS-1826-SM-5S2N6

60-69 years, male

6.1

GTEX-11DXY-0326-SM-5H12F

60-69 years, male

6.0

GTEX-13NZ9-2026-SM-5KM1U

50-59 years, male

6.0

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	19.3

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 19.3

FF:10010-101C1

65,65,76 years, mixed

19.3