Tissue expression of BNC2 - Summary - The Human Protein Atlas

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BNC2

TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	BNC2
Gene description	Basonuclin 2
Protein class	Predicted intracellular proteins Transcription factors
Predicted localization	Intracellular
Number of transcripts	13
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (endometrium, ovary, smooth muscle)
GTEx:	Tissue enhanced (endometrium, ovary)
FANTOM5:	Tissue enhanced (endometrium, ovary)

Protein evidence

Evidence at protein level

Protein expression

Nuclear and cytoplasmic expression in several tissues, most abundant in glandular and stroma cells.

DATA RELIABILITY
Data reliability description	Antibody staining mainly not consistent with RNA expression data. Presumed off target binding observed and disregarded.
Reliability score	Approved based on 1 antibody. HPA018525
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (endometrium, ovary, smooth muscle)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (endometrium, ovary)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (endometrium, ovary)

GENE INFORMATION
Gene name	BNC2 (HGNC Symbol)
Synonyms	BSN2, FLJ20043
Description	Basonuclin 2 (HGNC Symbol)
Entrez gene summary
Chromosome	9
Cytoband
Chromosome location (bp)	16409503 - 16870843
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000173068 (version 83.38)
Entrez gene	54796
UniProt	Q6ZN30 (UniProt - Evidence at protein level)
neXtProt	NX_Q6ZN30
Antibodypedia	BNC2 antibodies

PROTEIN BROWSER

BNC2-002	BNC2-003	BNC2-005	BNC2-007	BNC2-008	BNC2-009	BNC2-010	BNC2-011	BNC2-012	BNC2-013	BNC2-014	BNC2-015	BNC2-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
BNC2-002 ENSP00000474468 ENST00000468187	S4R3K9 [Direct mapping] Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0008270 [zinc ion binding] Show all	109 aa 12.5 kDa	No	0
BNC2-003 ENSP00000474832 ENST00000471301	S4R3X5 [Direct mapping] Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0008270 [zinc ion binding] Show all	43 aa 4.9 kDa	No	0
BNC2-005 ENSP00000392212 ENST00000411752	H0Y4J1 [Direct mapping] Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0005886 [plasma membrane] GO:0046872 [metal ion binding] Show all	327 aa 36.9 kDa	No	0
BNC2-007 ENSP00000474647 ENST00000486514	S4R3R8 [Direct mapping] Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		164 aa 18.9 kDa	No	0
BNC2-008 ENSP00000370047 ENST00000380672	Q6ZN30 [Direct mapping] Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Transcription factors Zinc-coordinating DNA-binding domains Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003416 [endochondral bone growth] GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0005886 [plasma membrane] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0043586 [tongue development] GO:0046872 [metal ion binding] GO:0060021 [palate development] GO:0060485 [mesenchyme development] Show all	1099 aa 122.3 kDa	No	0
BNC2-009 ENSP00000408370 ENST00000418777	H0Y6W5 [Direct mapping] Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0005886 [plasma membrane] GO:0046872 [metal ion binding] Show all	860 aa 96.5 kDa	No	0
BNC2-010 ENSP00000370042 ENST00000380667	B1APH0 [Direct mapping] Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0005886 [plasma membrane] GO:0046872 [metal ion binding] Show all	1032 aa 114.5 kDa	No	0
BNC2-011 ENSP00000474045 ENST00000603713	Q06HB9 [Direct mapping] Basonuclin 2; Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		245 aa 27.8 kDa	No	0
BNC2-012 ENSP00000473935 ENST00000603313	S4R351 [Direct mapping] Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		121 aa 13.7 kDa	No	0
BNC2-013 ENSP00000370041 ENST00000380666	Q06HC2 [Direct mapping] Basonuclin 2; Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		295 aa 33.3 kDa	No	0
BNC2-014 ENSP00000477717 ENST00000613349	Q06HC7 [Direct mapping] Basonuclin 2; Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		40 aa 4.5 kDa	No	0
BNC2-015 ENSP00000482793 ENST00000617779	Q06HC7 [Direct mapping] Basonuclin 2; Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		40 aa 4.5 kDa	No	0
BNC2-201 ENSP00000444640 ENST00000545497	F5H586 [Direct mapping] Zinc finger protein basonuclin-2 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005634 [nucleus] GO:0005654 [nucleoplasm] GO:0005737 [cytoplasm] GO:0005886 [plasma membrane] GO:0046872 [metal ion binding] Show all	729 aa 81.5 kDa	No	0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.