Tissue expression of SNX31 - Summary - The Human Protein Atlas

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SNX31

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	SNX31
Gene description	Sorting nexin 31
Protein class	Predicted intracellular proteins Transporters
Predicted localization	Intracellular
Number of transcripts	6
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enhanced (urinary bladder)
GTEx:	Tissue enriched (urinary bladder)
FANTOM5:	Tissue enhanced (prostate, tonsil, vagina)

Protein evidence

Evidence at protein level

Protein expression

Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification. Antibody staining not consistent with RNA expression data.
Reliability score	Uncertain based on 2 antibodies. HPA024284 , HPA053466
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

N/A

Caudate

N/A

N/A

Cerebellum

N/A

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

N/A

Bronchus

N/A

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

N/A

Skin

N/A

Skin

N/A

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (urinary bladder)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (urinary bladder)
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Tissue enhanced (prostate, tonsil, vagina)

GENE INFORMATION
Gene name	SNX31 (HGNC Symbol)
Synonyms	MGC39715
Description	Sorting nexin 31 (HGNC Symbol)
Entrez gene summary
Chromosome	8
Cytoband	q22.3
Chromosome location (bp)	100572882 - 100663415
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000174226 (version 83.38)
Entrez gene	169166
UniProt	Q8N9S9 (UniProt - Evidence at protein level)
neXtProt	NX_Q8N9S9
Antibodypedia	SNX31 antibodies

PROTEIN BROWSER

SNX31-001	SNX31-002	SNX31-003	SNX31-004	SNX31-005	SNX31-007

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SNX31-001 ENSP00000312368 ENST00000311812	Q8N9S9 [Direct mapping] Sorting nexin-31 Show all	Transporters Predicted intracellular proteins Protein evidence (Kim et al 2014) Show all	GO:0005515 [protein binding] GO:0005769 [early endosome] GO:0006886 [intracellular protein transport] GO:0035091 [phosphatidylinositol binding] GO:0043234 [protein complex] GO:1990126 [retrograde transport, endosome to plasma membrane] Show all	440 aa 50.8 kDa	No	0
SNX31-002 ENSP00000405024 ENST00000428383	Q8N9S9 [Direct mapping] Sorting nexin-31 Show all	Transporters Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0005769 [early endosome] GO:0006886 [intracellular protein transport] GO:0035091 [phosphatidylinositol binding] GO:1990126 [retrograde transport, endosome to plasma membrane] Show all	341 aa 39.1 kDa	No	0
SNX31-003 ENSP00000428210 ENST00000520352	E5RJK2 [Direct mapping] Sorting nexin-31 Show all	Predicted intracellular proteins Show all	GO:0005856 [cytoskeleton] GO:0035091 [phosphatidylinositol binding] Show all	124 aa 14.2 kDa	No	0
SNX31-004 ENSP00000428262 ENST00000520743	E5RJE9 [Direct mapping] Sorting nexin-31 Show all	SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Show all	GO:0035091 [phosphatidylinositol binding] Show all	100 aa 11.4 kDa	No	0
SNX31-005 ENSP00000428855 ENST00000520661	E5RFI8 [Direct mapping] Sorting nexin-31 Show all	Predicted intracellular proteins Show all	GO:0035091 [phosphatidylinositol binding] Show all	137 aa 15.6 kDa	No	0
SNX31-007 ENSP00000429110 ENST00000518342	H0YBA9 [Direct mapping] Sorting nexin-31 Show all	Predicted intracellular proteins Show all		48 aa 5.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.