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CKAP5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.2TPM
GTEx:10.5RPKM
FANTOM5:31.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA039377

  

Antibody HPA040375

  

Endothelial cells

 Medium   High  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

19.2
overview Male, age 54 Sample 1
TPM: 22.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 25
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 38.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 22.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 17.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 15.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 19.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 14
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 10.7
Samples: 149

Max RPKM: 16.8
Min RPKM: 4.7
Std RPKM: 1.8
Median RPKM: 10.5
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 16.8
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 15.8
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 15.5
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 15.1
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 14.8
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 14.6
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 14.3
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 14.3
GTEX-ZYFG-1826-SM-5GZWX 60-69 years, female 14.1
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 14.0
Show all
Colon - Transverse
RPKM: 10.3
Samples: 196

Max RPKM: 16.4
Min RPKM: 3.6
Std RPKM: 2.1
Median RPKM: 10.2
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 16.4
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 16.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 15.7
GTEX-144GN-1126-SM-5LU33 50-59 years, male 15.4
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 15.0
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 14.8
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 14.2
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 14.0
GTEX-117YX-0826-SM-5H11J 50-59 years, male 13.9
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 13.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

31.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 31.3
FF:10014-101C5 62,83,84 years, mixed 31.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.