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PHYHD1

COLON - Expression summary

RNA expression
HPA:4.8TPM
GTEx:4.8RPKM
FANTOM5:11.1Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

4.8
overview Male, age 54 Sample 1
TPM: 4.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 7.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.3
Samples: 149

Max RPKM: 11.5
Min RPKM: 2.1
Std RPKM: 1.8
Median RPKM: 6.1
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 11.5
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 11.1
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 10.9
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 10.4
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 10.1
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 9.9
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 9.7
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 9.7
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 9.5
GTEX-13111-1926-SM-5GCOL 50-59 years, male 9.3
Show all
Colon - Transverse
RPKM: 3.6
Samples: 196

Max RPKM: 10.5
Min RPKM: 0.4
Std RPKM: 2.4
Median RPKM: 2.8
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 10.5
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 10.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 10.2
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 9.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 9.3
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 9.3
GTEX-S341-1426-SM-4AD6U 40-49 years, female 8.7
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 8.6
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 8.5
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 8.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

11.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 11.1
FF:10014-101C5 62,83,84 years, mixed 11.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.