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ESOPHAGUS - Expression summary

RNA expression
HPA:17.5TPM
GTEx:5.3RPKM
FANTOM5:23.6Tags Per Million

ESOPHAGUS - Annotated protein expression

Pending normal tissue analysis

ESOPHAGUS - HPA RNA-seq

Average TPM

17.5
overview Female, age 70 Sample 1
TPM: 22.3
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 13.8
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 16.3
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

5.3

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 5.3
Samples: 286

Max RPKM: 12.0
Min RPKM: 1.4
Std RPKM: 1.8
Median RPKM: 5.3
GTEX-ZF3C-1626-SM-4WWB4 50-59 years, female 12.0
GTEX-OIZI-1426-SM-3NB1T 40-49 years, male 11.7
GTEX-RNOR-1226-SM-48FDQ 50-59 years, female 10.9
GTEX-12WSA-1426-SM-5EGJU 60-69 years, male 10.7
GTEX-11XUK-0826-SM-5GU6P 40-49 years, female 10.2
GTEX-ZYW4-1326-SM-5E45N 60-69 years, male 9.9
GTEX-ZXES-1126-SM-5GZXN 30-39 years, female 9.2
GTEX-RTLS-1126-SM-46MUQ 60-69 years, female 9.1
GTEX-ZPCL-1426-SM-57WEC 60-69 years, female 9.1
GTEX-WH7G-0926-SM-4LVMJ 40-49 years, male 9.0
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

23.6

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 23.6
FF:10015-101C6 68,74,75 years, mixed 23.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.