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APOF

GENERAL INFORMATION

Gene name

 APOF

Gene description

 Apolipoprotein F

Protein class

 Plasma proteins
Predicted secreted proteins

Predicted localization

 Secreted

Number of transcripts

 1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category
TCGA (cancer tissue):Tissue enriched (liver cancer)
HPA (cell line):Cell line enriched (Hep G2)
HPA (normal tissue):Tissue enriched (liver)

Protein evidence

 Evidence at protein level

ANTIBODY IHC RELIABILITY

Reliability score

 Pending cancer tissue analysis.

PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset
RNA cancer category: Tissue enriched (liver cancer)

PROTEIN EXPRESSION

Pending cancer tissue analysis

STAINING SUMMARY

 

GENE INFORMATION

Gene name

 APOF

Synonyms

Description

 Apolipoprotein F (HGNC Symbol)

Entrez gene summary

 The product of this gene is one of the minor apolipoproteins found in plasma. This protein forms complexes with lipoproteins and may be involved in transport and/or esterification of cholesterol. [provided by RefSeq, Jul 2008]

Chromosome

 12

Cytoband

 q13.3

Chromosome location (bp)

 56360569 - 56362823

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000175336 (version 83.38)

Entrez gene

 319

UniProt

 Q13790 (UniProt - Evidence at protein level)

neXtProt

 NX_Q13790

Antibodypedia

 APOF antibodies

PROTEIN BROWSER
APOF-001

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
APOF-001
ENSP00000381250
ENST00000398189
Q13790 [Direct mapping]
Apolipoprotein F
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   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
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GO:0005102 [receptor binding]
GO:0005319 [lipid transporter activity]
GO:0005576 [extracellular region]
GO:0006629 [lipid metabolic process]
GO:0006869 [lipid transport]
GO:0008203 [cholesterol metabolic process]
GO:0015485 [cholesterol binding]
GO:0034362 [low-density lipoprotein particle]
GO:0034364 [high-density lipoprotein particle]
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 326 aa
35.4 kDa 		Yes 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.