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LPL

COLON - Expression summary

RNA expression
HPA:10.2TPM
GTEx:7.4RPKM
FANTOM5:218.6Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

10.2
overview Male, age 54 Sample 1
TPM: 4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 26.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 6.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 59.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 8.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.0
Samples: 149

Max RPKM: 43.9
Min RPKM: 0.7
Std RPKM: 6.1
Median RPKM: 6.1
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 43.9
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 31.6
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 29.2
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 25.2
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 24.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 23.2
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 21.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 19.8
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 18.8
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 18.5
Show all
Colon - Transverse
RPKM: 6.9
Samples: 196

Max RPKM: 269.8
Min RPKM: 0.4
Std RPKM: 20.2
Median RPKM: 3.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 269.8
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 63.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 57.7
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 41.8
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 26.2
GTEX-S341-1426-SM-4AD6U 40-49 years, female 25.8
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 17.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 15.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 15.1
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 12.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

218.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 218.6
FF:10014-101C5 62,83,84 years, mixed 218.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.